Source code for pymc.model.transform.optimization

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from pytensor import clone_replace
from pytensor.compile import SharedVariable
from pytensor.graph import FunctionGraph
from pytensor.tensor import constant

from pymc import Model
from pymc.model.fgraph import ModelFreeRV, fgraph_from_model, model_from_fgraph


[docs] def freeze_dims_and_data(model: Model) -> Model: """Recreate a Model with fixed RV dimensions and Data values. The dimensions of the pre-existing RVs will no longer follow changes to the coordinates. Likewise, it will not be possible to update pre-existing Data in the new model. Note that any new RVs and Data created after calling this function will still be "unfrozen". This transformation may allow more performant sampling, or compiling model functions to backends that are more restrictive about dynamic shapes such as JAX. """ fg, memo = fgraph_from_model(model) # Replace mutable dim lengths and data by constants frozen_vars = { memo[dim_length]: constant( dim_length.get_value(), name=dim_length.name, dtype=dim_length.type.dtype ) for dim_length in model.dim_lengths.values() if isinstance(dim_length, SharedVariable) } frozen_vars |= { memo[data_var].owner.inputs[0]: constant( data_var.get_value(), name=data_var.name, dtype=data_var.type.dtype ) for data_var in model.named_vars.values() if isinstance(data_var, SharedVariable) } old_outs, coords = fg.outputs, fg._coords # type: ignore # Rebuild strict will force the recreation of RV nodes with updated static types new_outs = clone_replace(old_outs, replace=frozen_vars, rebuild_strict=False) # type: ignore for old_out, new_out in zip(old_outs, new_outs): new_out.name = old_out.name fg = FunctionGraph(outputs=new_outs, clone=False) fg._coords = coords # type: ignore # Recreate value variables from new RVs to propagate static types to logp graphs replacements = {} for node in fg.apply_nodes: if not isinstance(node.op, ModelFreeRV): continue rv, old_value, *dims = node.inputs if dims is None: continue transform = node.op.transform if transform is None: new_value = rv.type() else: new_value = transform.forward(rv, *rv.owner.inputs).type() # type: ignore new_value.name = old_value.name replacements[old_value] = new_value fg.replace_all(tuple(replacements.items()), import_missing=True) return model_from_fgraph(fg)
__all__ = ("freeze_dims_and_data",)